Practical Guide to Life Science Databases

Provides the latest and comprehensive information of life science databases that center in the life science research and drive the development of the field.

Systematically introduce the fundamental principles, rationales and methodologies of creating and updating life science databases.

Includes a user-oriented illustration of how to interact with each database by giving demonstration examples and use-cases.

Gives the reader the necessary knowledge and provide researcher with the fundamental grip to publish and share their data

Introduces the principles, rationales and methodologies of creating and updating life science databases Includes detailed demonstration examples and specific use-cases for each database Provides readers and researchers with the fundamental grip to publish and share their data

Auteur

Imad Abugessaisa, Laboratory for Large-Scale Biomedical Data Technology, *RIKEN *Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan
Takeya Kasukawa, Laboratory for Large-Scale Biomedical Data Technology, *RIKEN *Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan

Contenu
Chapter 1: GENCODE Annotation for the Human and Mouse Genome: A User Perspective.- Chapter 2: Genecard a database for gene annotation.- Chapter 3: IHEC: International human epigenome portal.- Chapter 4: Atlas of miRNAs and their Promoters in Human and Mouse.- Chapter 5: RefEX- Reference Expression Dataset.- Chapter 6: The mouse Gene Expression Database.- Chapter 7: ChIP-Atlas.- Chapter 8: Protein structural changes based on structural comparison.- Chapter 9: Single Cell Databases: an Emerging and Essential Tool.- Chapter 10: scIVA: Single Cell Interactive Visualisation and Analysis Data Mining Platform.- Chapter 11: Access and visualise high quality gene expression data with Stemformatics.- Chapter 12: Introduction to Practical Guide to Life Science Databases.